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three-dimensional pca plots  (Partek)

 
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    Partek three-dimensional pca plots
    The Fasciola hepatica miRnome displays temporal expression during the life cycle within the mammalian host. ( a ) Heatmap of the expression of the miRnome across triplicate RNA samples of newly excysted juveniles (NEJ), immature fluke (JUV) and adult parasites (AD) where minimum expression (low expression – blue) and maximum expression (high expression – red) of the individual miRNAs is represented. Hierarchical clustering of the average values of miRNAs and sample types was performed using One Pearson correlation. ( b ) Parallel coordinates of F. hepatica miRNA expression (logCPM) separately analysed based on category; miRBase miRNAs (blue), other published non-miRBase miRNAs (red) and novel miRNAs determined in this study (yellow). ( c ) Principal components analysis <t>(PCA)</t> <t>plots</t> of the total miRNA expression across all sample types and miRNAs in 3D (From left to right – front view, side view, top view). Size of the nodes depicts total miRNA input (miRNA presence) between sample types NEJ (green scale), immature flukes (orange scale) and adult parasites (blue scale).
    Three Dimensional Pca Plots, supplied by Partek, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/three-dimensional pca plots/product/Partek
    Average 90 stars, based on 1 article reviews
    three-dimensional pca plots - by Bioz Stars, 2026-04
    90/100 stars

    Images

    1) Product Images from "Stage-specific miRNAs regulate gene expression associated with growth, development and parasite-host interaction during the intra-mammalian migration of the zoonotic helminth parasite Fasciola hepatica"

    Article Title: Stage-specific miRNAs regulate gene expression associated with growth, development and parasite-host interaction during the intra-mammalian migration of the zoonotic helminth parasite Fasciola hepatica

    Journal: BMC Genomics

    doi: 10.1186/s12864-022-08644-z

    The Fasciola hepatica miRnome displays temporal expression during the life cycle within the mammalian host. ( a ) Heatmap of the expression of the miRnome across triplicate RNA samples of newly excysted juveniles (NEJ), immature fluke (JUV) and adult parasites (AD) where minimum expression (low expression – blue) and maximum expression (high expression – red) of the individual miRNAs is represented. Hierarchical clustering of the average values of miRNAs and sample types was performed using One Pearson correlation. ( b ) Parallel coordinates of F. hepatica miRNA expression (logCPM) separately analysed based on category; miRBase miRNAs (blue), other published non-miRBase miRNAs (red) and novel miRNAs determined in this study (yellow). ( c ) Principal components analysis (PCA) plots of the total miRNA expression across all sample types and miRNAs in 3D (From left to right – front view, side view, top view). Size of the nodes depicts total miRNA input (miRNA presence) between sample types NEJ (green scale), immature flukes (orange scale) and adult parasites (blue scale).
    Figure Legend Snippet: The Fasciola hepatica miRnome displays temporal expression during the life cycle within the mammalian host. ( a ) Heatmap of the expression of the miRnome across triplicate RNA samples of newly excysted juveniles (NEJ), immature fluke (JUV) and adult parasites (AD) where minimum expression (low expression – blue) and maximum expression (high expression – red) of the individual miRNAs is represented. Hierarchical clustering of the average values of miRNAs and sample types was performed using One Pearson correlation. ( b ) Parallel coordinates of F. hepatica miRNA expression (logCPM) separately analysed based on category; miRBase miRNAs (blue), other published non-miRBase miRNAs (red) and novel miRNAs determined in this study (yellow). ( c ) Principal components analysis (PCA) plots of the total miRNA expression across all sample types and miRNAs in 3D (From left to right – front view, side view, top view). Size of the nodes depicts total miRNA input (miRNA presence) between sample types NEJ (green scale), immature flukes (orange scale) and adult parasites (blue scale).

    Techniques Used: Expressing



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    The Fasciola hepatica miRnome displays temporal expression during the life cycle within the mammalian host. ( a ) Heatmap of the expression of the miRnome across triplicate RNA samples of newly excysted juveniles (NEJ), immature fluke (JUV) and adult parasites (AD) where minimum expression (low expression – blue) and maximum expression (high expression – red) of the individual miRNAs is represented. Hierarchical clustering of the average values of miRNAs and sample types was performed using One Pearson correlation. ( b ) Parallel coordinates of F. hepatica miRNA expression (logCPM) separately analysed based on category; miRBase miRNAs (blue), other published non-miRBase miRNAs (red) and novel miRNAs determined in this study (yellow). ( c ) Principal components analysis <t>(PCA)</t> <t>plots</t> of the total miRNA expression across all sample types and miRNAs in 3D (From left to right – front view, side view, top view). Size of the nodes depicts total miRNA input (miRNA presence) between sample types NEJ (green scale), immature flukes (orange scale) and adult parasites (blue scale).
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    Image Search Results


    The Fasciola hepatica miRnome displays temporal expression during the life cycle within the mammalian host. ( a ) Heatmap of the expression of the miRnome across triplicate RNA samples of newly excysted juveniles (NEJ), immature fluke (JUV) and adult parasites (AD) where minimum expression (low expression – blue) and maximum expression (high expression – red) of the individual miRNAs is represented. Hierarchical clustering of the average values of miRNAs and sample types was performed using One Pearson correlation. ( b ) Parallel coordinates of F. hepatica miRNA expression (logCPM) separately analysed based on category; miRBase miRNAs (blue), other published non-miRBase miRNAs (red) and novel miRNAs determined in this study (yellow). ( c ) Principal components analysis (PCA) plots of the total miRNA expression across all sample types and miRNAs in 3D (From left to right – front view, side view, top view). Size of the nodes depicts total miRNA input (miRNA presence) between sample types NEJ (green scale), immature flukes (orange scale) and adult parasites (blue scale).

    Journal: BMC Genomics

    Article Title: Stage-specific miRNAs regulate gene expression associated with growth, development and parasite-host interaction during the intra-mammalian migration of the zoonotic helminth parasite Fasciola hepatica

    doi: 10.1186/s12864-022-08644-z

    Figure Lengend Snippet: The Fasciola hepatica miRnome displays temporal expression during the life cycle within the mammalian host. ( a ) Heatmap of the expression of the miRnome across triplicate RNA samples of newly excysted juveniles (NEJ), immature fluke (JUV) and adult parasites (AD) where minimum expression (low expression – blue) and maximum expression (high expression – red) of the individual miRNAs is represented. Hierarchical clustering of the average values of miRNAs and sample types was performed using One Pearson correlation. ( b ) Parallel coordinates of F. hepatica miRNA expression (logCPM) separately analysed based on category; miRBase miRNAs (blue), other published non-miRBase miRNAs (red) and novel miRNAs determined in this study (yellow). ( c ) Principal components analysis (PCA) plots of the total miRNA expression across all sample types and miRNAs in 3D (From left to right – front view, side view, top view). Size of the nodes depicts total miRNA input (miRNA presence) between sample types NEJ (green scale), immature flukes (orange scale) and adult parasites (blue scale).

    Article Snippet: Three-dimensional PCA plots were generated using the Partek suite for data visualisation.

    Techniques: Expressing